121. 3rd Millennium, Inc. - Biopharma R&D Custom Informatics Systems bioinformatics consulting for pharmaceutical, biotech, and academic clients to design and develop R D software solutionsfrom Cambridge, MA. http://www.3rdmill.com

3rd Millennium, Inc. is the leading developer of custom software systems for biotech and pharmaceutical research and development. Since 1996, successful biopharmaceutical organizations have repeatedly enlisted us to design and develop informatics systems which help them achieve their research goals. Our clients benefit from our substantial life science background, informatics expertise, and portfolio of implemented systems, as well as our ability to deploy systems on time and on budget. Recent engagements have included systems for: scientific data integration and management, analysis pipelining, flexible workflow management, pathway informatics, complex LIMS, knowledge management . Call 888-373-6455 and ask for Consulting Services or e-mail consultingservices@3rdmill.com to find out how to get started with us. company information services initiatives and resources news and events ... site map Open Source-Free Distribution Software Data Centric Knowledge Management System W h i t e P a p e rs

122. Bioinformatics http://www.colorado.edu/chemistry/bioinfo/

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123. Inpharmatica - Proteome Analysis Offers platform, genomic and proteomic database for simultaneous bioinformatics, chemogenomics, disease indication and pharmacology research. Includes investor relationships, corporate news, recruitment in London, UK. http://www.inpharmatica.co.uk/

Latest News: (18 May 04) "Inpharmatica's Mission - to increase productivity throughout the gene-to-drug discovery process by faster, better target and lead selection." Inpharmatica, a leading informatics-driven drug discovery company, applies information from its platform technologies to the discovery of novel, druggable targets and corresponding drug compounds. Sitemap Legal Notice Site last updated 18th May 2004 © 2000 Inpharmatica

124. UPenn. Center For Bioinformatics University of Pennsylvania Center for bioinformatics. CAGR Computational Analysis of Gene Regulation. Affiliates, Database and bioinformatics Laboratory. http://www.pcbi.upenn.edu/

University of Pennsylvania Center for Bioinformatics Welcome Welcome to the Center for Bioinformatics, part of the Genomics Institute at the University of Pennsylvania . For information on the Bioinformatics Core Facility please click here Center for Bioinformatics Mission Statement Penn. Bioinformatics Forum Educational programs Travel information ... People Member organizations CBIL: Computational Biology and Informatics Laboratory Tools: Mouse Chr. 5 tpWY PaGE TESS ... OrthoMCL Databases: AllGenes EPConDB PlasmodiumDB StemCellDB ... ParaDBs Events: Lab. meeting schedule CBIL reading group DIANA: DNA and Protein Sequence Analysis Group Software: DIANA-EST Analyzer DIANA-TIS Analyzer CAGR: Computational Analysis of Gene Regulation Affiliates Database and Bioinformatics Laboratory Projects: Morphase News events First GPBA Seminar The Center for Bioinformatics is pleased to welcome Russ B. Altman, M.D., Ph.D., from the Stanford University Medical Center for the first seminar of the Greater Philadelphia Bioinformatics Alliance. Please follow this link for details.

125. Bioinformatics And Gene Network Research Group bioinformatics and gene network research group at Zhejiang University, Hangzhou, China. http://www.estarray.org/

English EST Services Software ... Bio-Links Email Address Password Home Magnaporthe grisea EST Navigation Oryza sativa ... Supply Data Array Introduction Navigation Search Supply Data Software DNAuser Pusamen Books ... Bio-Links Welcome to estarray "Bioinformatics and Gene Network Research Group" in Zhejiang University is located in Hangzhou, a beautiful city at the east coast of China. We have committed ourselves in the research, development of applied and theoretical gene engineering technology under the supervision of Prof. Debao Li and Dr. Haitao Dong. Our interests focus on the analysis and interpetation of EST data and the application of micro-array technology. Magnaporthe grisea EST W e have determined the nucleotide sequence of 21,527 expressed genes (ESTs) longer than 100 bp, from the rice blast fungus ( Magnaporthe grisea ). ESTs were from a normalized M.grisea cDNA library, it includes tissues like Mycellium, conidium, germinating conidium, swelling appressorium, mature appressorium and penetration peg. All ESTs represent an estimated 7,352 mRNA transcripts (Tentative Unique Transcripts, TUTs). The sequence data have been made public on NCBI dbEST.

126. Bioinformatics Information bioinformatics Information. http://www.bioinform.co.kr/

Bioinformatics Information Bioinformatics Course Series Databases Software Useful Links ... (in Korean) Biology easily has 500 years of exciting problems to work on. - Donald E. Knuth This web site is maintained by Dr. Seyeon Weon to provide bioinformatics related information mainly to the Korean research community. If you have comments or questions on this web site, please feel free to send email to s y w o n @ b i o i n f o r m a t i c s . p e . k r.

127. University Of Utah Department Of Medical Informatics Focus on clinical health information systems, computerized decisionmaking, evaluation of computerized patient care, genetic epidemiology/ bioinformatics, medical imaging, and medical informatics research. Details education, admission, FAQs, awards, reports, abstracts, past exams, poeple and research opportunities. http://www.med.utah.edu/medinfo/

University of Utah Graduate School Online Forms Health Sciences Center School of Medicine ... Eccles Health Sciences Library Department of Medical Informatics General Admissions Info Fellowships Upcoming Dissertation and Thesis ... T-shirts Department of Medical Informatics University of Utah School of Medicine 30 North 1900 East - Room AB193 Salt Lake City, UT 84132-2913 Tel.: (801) 581-4080 Fax: (801) 581-4297 lynn.ford@hsc.utah.edu Last Updated: October 10, 2003 Webmaster: Truman Ta

128. Bioinformatics Resources bioinformatics Resources. Search Databases. General Nucleotide Sequence Databases. Specific Human Genome Databases. Specific Genome Databases of all Other Species. http://www.genet.sickkids.on.ca/bioinfo_resources/

Bioinformatics Resources Search Databases General Nucleotide Sequence Databases Specific Human Genome Databases Specific Genome Databases of all Other Species ... Bio-Journals a big collection Bio-Companies and Suppliers News and Coming Events of Human Genome Research Calendar Return to our home page

129. AMMP- Molecular Dynamics, Structural Bioinformatics At Georgia State. AMMP is a modern fullfeatured molecular mechanics, dynamics and modeling program http://www.cs.gsu.edu/~cscrwh/ammp/ammp.html

130. Biocomp.arc.nasa.gov/ bioinformatics Research Center HomeWelcome. to the NC State University bioinformatics Research Center and Programs in bioinformatics and Statistical Genetics. Graduate Program in bioinformatics. http://biocomp.arc.nasa.gov/

131. Genops Bioinformatics - Ngene Ngene modular sequence analysis software suite for Windows and Mac. http://www.genops.com

132. Masters Of Science In Bioinformatics Masters of Science in bioinformatics What is bioinformatics? Program Overview. Application Request. FAQ Association of bioinformatics Students. Georgia Tech . http://www.biology.gatech.edu/bioinformatics/

Georgia Institute of Technology Masters of Science in Bioinformatics What is Bioinformatics? Program Overview ... Contact Us Designed by Amanda Besemer Sponsored by the Alfred P. Sloan Foundation

133. BBSRC Cereal Functional Genomics - Main Page Cereal functional genomics at the University of Bristol. bioinformatics tools for wheat and maize research including digital differential display, BLAST, electronic Northern blots and microarray analysis. http://www.cerealsdb.uk.net

cerealsDB.uk.net Investigating gene function in cereals IGF Program Wheat Maize SNPs Bioinformatics Personnel NEWS The 10K feature wheat developmental stage microarrays are now available, along with the unigene set: more details Maize and updated Wheat SNPs now available. The latest wheat build uses 397K public sequences The wheat EST database can now be searched by digital differential display as well as keyword/BLAST. Overview In the Functional Genomics group at the University of Bristol , we are (in collaboration with Rothamstead Research) investigating gene function in wheat and maize as part of the BBSRC IGF program . In wheat , we have obtained 26K quality and vector trimmed EST's from 35 cDNA libraries relating to different stages of grain development and various stress treatments. These sequences have be used to produce a ~10K feature unigene set, which has been arrayed on to glass slides. These arrays are currently being used for high-throughput gene expression studies, and are available to the wider public on request. In maize we have produced transposon mutagenesis resources based on Robertson's Mutator ( Mu ) transposable elements. These include a classic

134. Stockholm Bioinformatics Center Welcome to Stockholm bioinformatics Center! Open position Professor of bioinformatics (announcement in pdfformat). Open PhD position http://www.sbc.su.se/

Home Research Groups News About SBC ... Intranet Quick links DAS ProQ Pmembr Pcons ... PRODIV-TMHMM Welcome to Stockholm Bioinformatics Center! Open position: Professor of Bioinformatics ( announcement in pdf-format Open PhD position: announcement in pdf-format Postal address: Stockholm Bioinformatics Center, SCFAB, Stockholm University, SE-10691 Stockholm, Sweden. Address for package/courier deliveries: Stockholm Bioinformatics Center, Stockholm University, Roslagsvägen 30 B, SE-113 47 Stockholm, Sweden Visiting address: Corridor A2, Stockholms Centrum för Fysik, Astronomi och Bioteknik, Roslagstullsbacken 21 (from Ruddammen) or Roslagsvägen 30 D (from Albano), Stockholm. Fax number: General enquiries: staff@sbc.su.se (Google Site Search) any problems? contact the webmaster

135. Science Functional Genomics Resources: Educational Resources Glossaries in genetics and genomics, molecular biology and biochemistry, postgenomics, biotechnology and bioinformatics (including proteomics)and medical genomics from Science Magazine Online. http://www.sciencemag.org/feature/plus/sfg/education/glossaries.shtml

The rapid changes afoot in genomics, bioinformatics, and gene medicine are forcing scientists, policymakers, and the public alike to grapple with some unfamiliar terminology. The Web, fortunately, offers a rich supply of online glossaries and dictionaries to help make sense of it all. A bit too rich, in fact; to narrow down the choices, we've gathered on this page some of the better online glossaries out there. We've awarded a rosette ( ) to the top sites in selected categories, and a star ( ) to denote additional standout resources. In conferring these rankings, we've tended to favor comprehensive sites that make good use of the Web, through functionality such as internal hyperlinking of related terms. (Those not so honored are still excellent, however, and are well worth a visit.) Genetics and genomics General biology, molecular biology, and biochemistry Post-genomics, biotech, and bioinformatics Medical genomics ... Specific organisms and topics Genetics and genomics Glossaries focusing on genetics and genomics, particularly with respect to the human genome. Talking Glossary of Genetic Terms (from the National Human Genome Research Institute Although not the most comprehensive of the many online genomics glossaries, the NHGRI's entry is the best-known, the most accessible, and ultimately the most fun. You can search or browse a list of 188 terms in the database, each linked to a cogent definition, related terms, and, in some cases, illustrations. What gives this resource extra interest, though, are accompanying streaming-audio elaborations, each a minute or so in length, by various scientists (here's an example, for the term

136. UTEP Bioinformatics http://www.bioinformatics.utep.edu/

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137. ScienceJobs.com - Search Lists a variety of academic, government and industry vacancy listings in the biosciences, including bioinformatics and chemistry related positions. US based. http://www.sciencejobs.com/bio/

Home News Jobs Archive ... Subscribe Search Discovery! Explore biotech opportunities Be searched by the best The Resume Database is live! Post your resume and let the finest employers find you. Advertise on Target! Academics/Non-profit organizations can post science jobs for only $195 Industry employers just $295 Username: Password: Forgotten your password? SUBSCRIBE NOW May 27 - Search over 1249 of the latest jobs in science You can search multiple disciplines A tick indicates you have selected options in that discipline. All jobs Biochemistry jobs Food Science jobs Proteomics jobs Bioinformatics jobs Forensic jobs Psychology jobs Biophysics jobs Genetics jobs Quality Control jobs Biostatistics jobs Genomics jobs Regulatory Affairs/IPR Biotechnology jobs Immunology jobs Botany/Plant Science Medicine/Clinical Trials Sport Science jobs Cancer/Oncology jobs Microbiology jobs Structural Biology jobs Cardiology jobs Molecular Biology jobs Toxicology jobs Cell Biology jobs Nanotechnology jobs Veterinary jobs Developmental Biology Neurosciences jobs Virology jobs Drug Development jobs Nutrition jobs Zoology jobs Drug Discovery jobs Pathology jobs Other jobs Ecology/Env. Science

138. University Of Bristol - Computational Intelligence Group Research on kernel methods, support vector machines, neural networks, machine vision, bioinformatics, computational learning theory. http://lara.enm.bris.ac.uk/cig/

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139. Bioinformatics Software On The Web Emotif ranks the motifs that it finds by both their specificity and the number of supplied sequences that it covers.(Stanford bioinformatics Group); http://www.cs.jhu.edu/~salzberg/appendixa.html

Appendix A. Software and Databases for Computational Biology on the Internet This page is a supplement to the book Computational Methods in Molecular Biology , edited by Steven Salzberg, David Searls, and Simon Kasif. The publisher is Elsevier Sciences. Please contact Steven Salzberg (salzberg@cs.jhu.edu) if you wish to have your software referenced on this site, or if you wish to change the description of your software already listed here. The on-line version of this page, in which all the systems below are hot links, can be found at http://www.tigr.org/~salzberg/compbio-book.html. Databases Motif Search Secondary Structure Prediction Other software and information sources Gene finders and other sequence analysis programs Glimmer is a system that uses Interpolated Markov Models (IMMs) to identify coding regions in microbial DNA. IMMs are a generalization of Markov models that allow great flexibility in the choice of the "context"; i.e., how many previous bases to use in predicting the next base. Glimmer has been tested on the complete genomes of H. influenzae, E. coli, H. pylori, M. genitalium, and other genomes, and results to date have proven it to be highly accurate. Glimmer was the principal gene finder for the genomes of B.

140. Kinexus Kinexus is harnessing the powerful synergies of genomics, proteomics and bioinformatics to understand cell signalling for the advancement of drug discovery, disease diagnosis, and global biomedical research. http://www.kinexus.ca

Kinexus is harnessing the powerful synergies of genomics, proteomics and bioinformatics to understand cell signalling for the advancement of drug discovery, disease diagnosis, and global biomedical research. legal contact us site map our services ... acknowledgements

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