141. JST Humen Genome Sequencing Home Page teams contracted with JST. JST sequence Regions are targets to sequence for JST Human Genome sequencing Project. JST regions are at http://www-alis.tokyo.jst.go.jp/HGS/top.pl

Japan Science and Technology Agency ( JST ) Advanced Lifescience Information System ( ALIS ) JST sequencing was complete. The ALIS Project in JST encourages large-scale DNA sequencing Projects in Japan. Sequencing data carried out by this projects is available here. Japanese page is here. Jump to menu. search for all terms that begin with the given word. Archive of Previous Items Nov.12,2001 Complete gene annotations are available for 6p21.3. Mar.30,2001 NCBI contig sequences on chromosome 21 and chromosome 22 to which JST sequencing Project have contributed are available now. detail The sequence of human chromosome 21 has been completed by The chromosome 21 consortium of sequencing centers which Keio University and Kitasato University teams have contributed to. Nature, vol.405 311-319 The sequence of human chromosome 22 has been completed by The chromosome 22 consortium of sequencing centers which Keio University team has contributed to. Nature, vol.402 489-495 The complete nucleotide sequence of human major histocompatibility complex on chromosome 6 was determined by The MHC sequencing consortium Tokai University team has contributed to. Nature, vol.401 921-923

142. Ensembl Genome Browser Ensembl is a joint Project between EMBLEBI and the Sanger Institute to develop a software system which produces and maintains automatic annotation on eukaryotic genomes. the data and software from the Ensembl Project. Click on the species http://www.ensembl.org/

Ensembl Genome Browser Search Ensembl Search all species for Anything Disease Domain EST Family Gene MRNA Marker Peptide Protein QTL SNP SangerProject Sequence Unigene with About Ensembl Ensembl is a joint project between EMBL - EBI and the Sanger Institute to develop a software system which produces and maintains automatic annotation on metazoan genomes. Ensembl is primarily funded by the Wellcome Trust This site provides free access to all the data and software from the Ensembl project. Click on the species buttons to the right to browse the data. Access to all the data produced by the project, and to the software used to analyse and present it, is provided free and without constraints. Some data and software may be subject to third-party constraints [ details For all enquiries, please contact the Ensembl HelpDesk helpdesk@ensembl.org Help and documentation Take the Ensembl tour , go through a step-by-step worked example , or read these papers For help on any web page click: There is also an index of help pages, and a set of guided

143. Genome Bioinformatics Genome Bioinformatics This nofrills UC-Santa Cruz Genome Bioinformatics Web site contains searchable "working drafts of the Human Genome and the mouse Genome " which each represent Âimmense http://rdre1.inktomi.com/click?u=http://genome.ucsc.edu/&y=02A7B3490FD02958&

144. UCSC Genome Browser Home Expression Atlas 2 Data Available in Browser Expression data from the GNF Gene Expression Atlas 2 are now available on the July 2003 Human Genome assembly on http://genome.ucsc.edu/

Genome Browser Gene Sorter Blat Table Browser ... Contact Us About the UCSC Genome Bioinformatics Site This site contains the reference sequence for the human and C. elegans genomes and working drafts for the chimpanzee, mouse, rat, chicken, Fugu Drosophila C. briggsae , yeast, and SARS genomes. It also shows the CFTR (cystic fibrosis) region in 13 species. We encourage you to explore these sequences with our tools. The Genome Browser zooms and scrolls over chromosomes, showing the work of annotators worldwide. The Gene Sorter shows expression, homology and other information on groups of genes that can be related in many ways. The Proteome Browser displays protein property data and links to a wealth of related information. The Table Browser provides convenient access to the underlying database. Blat quickly maps your sequence to the genome. News 28 May 2004 - Family Browser Changing its Name What's in a name? In an effort to clarify the role of the UCSC Family Browser, we have changed its name to the UCSC Gene Sorter. We think this name better describes this tool, which lets the user collect information on groups of genes that may be related in many different ways. The Gene Sorter provides a wealth of information on gene expression, protein homology (both within and across species), GO terms, and Pfam domains, cross links to many other databases, and much more.

145. NCBI Human Genome Resources A guide to online information resources for Human Genome research. Titles of selected chapters that refer to Human Genome resources are shown below. of data currently being generated through http://www.ncbi.nlm.nih.gov/genome/guide/human

NCBI Home Genomic Biology Homo sapiens Browse Your Genome Click on a chromosome to show Clones Genes Physical Maps Linkage Maps Variation The NCBI Handbook An online guide to the use of NCBI resources. Titles of selected chapters that refer to human genome resources are shown below. The Single Nucleotide Polymorphism Database (dbSNP) of Nucleotide Sequence Variation. by Adrienne Kitts and Stephen Sherry The Gene Expression Omnibus (GEO): A Gene Expression and Hybridization Repository. by Ron Edgar and Alex Lash Online Mendelian Inheritance in Man (OMIM): A Directory of Human Genes and Genetic Disorders. by Donna Maglott, Joanna S. Amberger, and Ada Hamosh The SKY/CGH Database for Spectral Karyotyping and Comparative Genomic Hybridization Data. by Turid Knutsen, Vasuki Gobu, Rodger Knaus, Thomas Ried, and Karl Sirotkin Genome Assembly and Annotation Process. by Paul Kitts The Reference Sequence (RefSeq) Project. by Kim D. Pruitt, Tatiana Tatusova, and James M. Ostell LocusLink: A Directory of Genes. by Donna Maglott Using the Map Viewer to Explore Genomes.

146. Generic Model Organism Database Construction Set Bioinformatics resources, and projects of the Agricultural Research Service, and the National Human Genome Research Institute and the National Institute of General Medical Sciences. http://www.gmod.org/

Generic Model Organism Database Construction Set GMOD Resources Home About News Mailing Lists ... The Developer's Guide Downloads Via the Web Via FTP Via Anonymous CVS Browsable CVS Demos Generic Genome Browser GMOD website Genome Renderer GMOD Standard Operating Procedures (SOPs) Links to Related Projects FlyBase MGI SGD WormBase ... Manual Annotation Tool Etc, Etc... GMOD is supported by a specific cooperative agreement from the USDA Agricultural Research Service, and by NIH grants co-funded from the National Human Genome Research Institute and the National Institute of General Medical Sciences. This is the home page of the Generic Model Organism Project (GMOD), a joint effort by the model organism system databases WormBase FlyBase MGI SGD ... EcoCyc , and TAIR to develop reusable components suitable for creating new community databases of biology. Recent News GO::TermFinder 0.6 Released scottcain - 2004-05-07 06:00 Slides from April meeting now available scottcain - 2004-05-05 12:53 New GMOD homepage scottcain - 2004-05-05 10:55 GMOD Meeting in Cambridge, Mass. April 26-28

147. Nature Genome Gateway - Human Genome - Web Specials - Nhgri Cd Rom Nature is delighted to provide access to a web version of the National Human Genome Research Institute s interactive CDROM Exploring Our Molecular Selves . http://www.nature.com/genomics/human/cd/cd_rom.html

Nature is delighted to provide access to a web version of the National Human Genome Research Institute's interactive CD-ROM Exploring Our Molecular Selves '. The content includes: An interactive timeline that will guide you through the history of genetic research from Gregor Mendel's demonstration of the transmission of heredity in discrete units, through Watson and Crick's resolution of the structure of DNA, to today's publication of the sequence of the human genome. An animated journey inside the human body, illustrating how the DNA is transcribed into RNA, and thence translated into proteins, the building blocks of the body. An investigation into genes, variation and human history A do-it-yourself guide to how to sequence a genome An assessment of the future of research in medicine Just click here and enjoy the experience!

148. Human Genome Project And Biology Resources High School Human Genome ProgramWelcome to the High School Human Genome Program web resource. Our program provides professional development in the field of DNA http://www.gdb.org/gdb/hgpResources.html

Human Genome Project Resources The Genome Database (GDB) The Human Genome Organisation (HUGO) The HUGO Nomenclature Committee The HUGO/GDB Editor List ... Sequencing Projects Other Biology Resources Other Hopkins Bio Servers Selected Online Journals Vendors of Equipment, Reagents, and Software If you would like to suggest a server to be included, please send mail to data@gdb.org Human Genome Centers and Contacts Human Genome Center Director Informatics Contact Baylor College of Medicine Human Genome Center Richard Gibbs Andy Arenson Columbia University Genome Center ... Perry Miller Human Chromosome-Specific WWW Servers Chromosome 1 (Rutgers University) Chromosome 1 (Sanger Centre) Chromosome 3 (University of Texas, San Antonio) Chromosome 5 (University of California, Irvine) Chromosome 6 (Sanger Centre) Chromosome 7 (Hospital for Sick Children, Toronto) Chromosome 7 (The National Human Genome Research Institute) Chromosome 8 (University of Texas, San Antonio) Chromosome 9 (London) Chromosome 9 (Sanger Centre) Chromosome 10 (Sanger Centre) Chromosome 10 (Genome Therapeutics Corp.)

149. Center For Human Genome Studies -- LANL Site under reconstruction. For Human chromosome 16 data goto the JGI. Proud member of DOE s Joint Genome Institute. CENTE R for HUMA http://www-ls.lanl.gov/

Site under reconstruction For human chromosome 16 data goto the JGI Biosciences Division Joint Genome Institute Los Alamos National Laboratory Proud member of DOE's Joint Genome Institute. C E N T E R for H U M A N G E N O M E S T U D I E S Operated by the University of California for the US Department of Energy email

150. LBNL Human Genome Center Home Page Lawrence Berkeley National Laboratory. Human Genome Sequencing Department. The LBNL Human Genome Sequencing Department is now part http://www-hgc.lbl.gov/

Lawrence Berkeley National Laboratory Human Genome Sequencing Department The LBNL Human Genome Sequencing Department is now part of the Joint Genome Institute , which also involves the Human Genome centers at Lawrence Livermore National Laboratory and Los Alamos National Laboratory Visit the Joint Genome Institute for further information.

151. GenomeNet HyperGenome Human Genome and Diseases Database. Anonymous FTP of the GenomeNet. Acknowledgments. GenomeNet service by Kyoto University http://www.genome.ad.jp/

KEGG BRITE DBGET IDEAS ... MOTIF Search PATHWAY KO GENES GENOME LIGAND COMPOUND GLYCAN REACTION ENZYME RefSeq GenBank EMBL UniProt Swiss-Prot PIR PRF PDBSTR PDB EPD PROSITE BLOCKS ProDom PRINTS Pfam OMIM PMD AAindex LITDB for Welcome to GenomeNet About GenomeNet and Bioinformatics Center What's New (Last updated: May 10, 2004) Announcements (Last updated: May 14, 2004) Bioinformatics Program - Career opportunities in Kyoto and Tokyo Summary of GenomeNet Database Service Database Release Information (Daily updated) Growth of Major Databases (Since 1982) Complete Genomes in KEGG (Last updated: May 25, 2004) GenomeNet Database Service KEGG: Kyoto Encyclopedia of Genes and Genomes KEGG Table of Contents PATHWAY - Pathways and complexes [ update status GENES - Gene annotations [ update status LIGAND - Chemical compounds and reactions [ update status EXPRESSION - Microarray gene expression profiles BRITE - Protein-protein interactions and relations KGML - XML representation of KEGG pathways KEGG API - SOAP interface for KEGG services DBGET Integrated Database Retrieval System DBGET Database Links Diagram IDEAS Interface to DBGET/BLAST/FASTA LinkDB - Web of molecular biology data [ update status Sequence Interpretation Tools BLAST - Sequence similarity search FASTA - Sequence similarity search MOTIF - Sequence motif search CLUSTALW - Multiple sequence alignment Genome Databases in Japan BSORF - Bacillus subtilis Genome Database CYORF - Cyanobacteria Gene Annotation Database HyperGenome - Human Genome and Diseases Database Anonymous FTP of the GenomeNet Acknowledgments GenomeNet service by Kyoto University Bioinformatics Center - System last updated 2004/04/01

152. Celera Discovery System Login Consensus Human Genome. Celera s Human assembly provides the most comprehensive view of the Human Genome. Using approximately 5x http://publication.celera.com/humanpub/index.jsp

153. Untitled Document by the Baylor College of Medicine Human Genome Sequencing Center Summary information for all BAC projects is available Fisher to find Whole Genome Shotgun reads http://www.hgsc.bcm.tmc.edu/projects/rat/

19 Jun 2003 Assembled rat genomic sequence: 2.57 Gb in 419 ultrabactigs spanning 2.74 Gb with ultrabactig N50 = 18.5 Mb and contig N50 = 36.9 kb Also 22,267 BACs and 38,571,029 reads available at the NCBI Recent Assemblies Bactigs BAC Fisher ... Rat QTL The HGSC is sequencing the genome of the rat ( Rattus norvegicus ). This rodent is important as a model organism for cardiovascular and psychological research, and has a legacy of decades of study of its physiology in academia and industry. A public release draft genome assembly (v3.1) covering more than 90% of the estimated 2.8 Gb genome is available for download . Genome browsers for this data are listed in the resource section below. A brief description of the assembly is available The National Institutes of Health (NIH) Rat Genome Sequencing network is funded by the National Heart, Lung, and Blood Institute (NHLBI) and the National Human Genome Research Institute (NHGRI) . See the press releases The Rat Genome Sequencing Consortium is led by the Baylor College of Medicine Human Genome Sequencing Center, and is a collaboration with Celera Genomics,

154. Www.mcet.edu/humangenome/overview.html Genome The Secret of How Life Works HomeThe future is here! Scientists have mapped the Human Genome - your complete set of genes. Genes are the secret codes, or recipes http://www.mcet.edu/humangenome/overview.html

155. NCGR in 1994, NCGR s mandate was to develop the Genome Sequence Data Base (GSDB), the first publicly accessible, relational database of Human Genome sequences from http://www.ncgr.org/

News Stephen Kingsmore joins NCGR as President more Susan Baxter joins NCGR as Chief Operating Officer more NCGR awarded $1.2M by USDA for the continuation of MPI more Events Seminar Series: hot topics, notable guests more Symposium for a National Tuberculosis Archival System more The National Center for Genome Resources (NCGR) in Santa Fe, New Mexico, is an independent, nonprofit research institution that develops and uses informatics for biological discovery. Scientists at NCGR study the influence of genetic variability of both host and pathogen on infectious disease progression and its subsequent impact on human health. Computational biologists, population geneticists, and mathematicians are developing and using novel algorithms and statistical approaches to model complex biological systems. Particular emphasis is placed on meeting the challenges presented in systems biology today, including sparse experimental datasets, poorly defined biological networks, and data collected on disparate timescales. NCGR is a unique provider of professionally engineered software and computational discovery platforms for the scientific community. At its inception in 1994, NCGR's mandate was to develop the Genome Sequence Data Base (GSDB), the first publicly accessible, relational database of human genome sequences from Los Alamos National Laboratory. NCGR has continued to design and maintain publically accessible genomic information resources, such as TAIR and LIS, as well as novel bioinformatic tools, such as Gene-X Lite, ISYS, and XGI, used at research institutions worldwide. Software engineers and developers at NCGR are experienced at creating bioinformatics platforms, incorporating automated annotation and visualization tools, for genome mapping and pathway analysis based on data obtained from high-throughput biotechnologies.

156. RUSSIAN NATIONAL HUMAN GENOME PROGRAM RUSSIAN NATIONAL Human Genome PROGRAM. Choose Your Encoding. http://www.eimb.relarn.ru/hugo/

RUSSIAN NATIONAL HUMAN GENOME PROGRAM Choose Your Encoding Our address: Scientific Council Human Genome, Vavilov str., 32, room 320 Moscow B-334 119991 Russia Telephone: (7-095)135-7445; Fax (7-095)135-1405 e-mail: h-sov@eimb.ru

157. Mapping The Icelandic Genome Mapping the Icelandic Genome An ANTHROPOLOGY of the scientific, political, economic, religious, and ethical issues surrounding the deCode Project and its http://sunsite.berkeley.edu/biotech/iceland/

Enter the Forum What's New About this site Mapping the Human Genome Project(s) ... Home An ANTHROPOLOGY of the scientific, political, economic, religious, and ethical issues surrounding the deCode Project and its global implications. Jointly organized by the Anthropology Department at the University of California at Berkeley and the Institute of Anthropology at the University of Iceland. reproduced by permission of the artist: Karolina Larusdottir Document maintained on server: http://sunsite.berkeley.edu/ If you have questions about this page, mail scalpest@library.berkeley.edu Last update 7/19/99. Server manager: manager@sunsite.berkeley.edu

158. Genome Database (GDB) Genome Database (GDB) Established at Johns Hopkins University in Baltimore, Maryland, USA in 1990, the Genome Database (GDB) is the official central repository for genomic mapping data resulting http://rdre1.inktomi.com/click?u=http://www.gdb.org/&y=025961CF017F386F&

159. Www.rzpd.de and genomic DNA Pools according to customers needs. The PCRbased Screening Service can be used to analyze libraries of well-known species like Human, mouse http://www.rzpd.de/

Home Register Press Contact ... Shopping Cart Your e-mail or User ID: Password: Register Information Product Search Services Advanced Search ... About RZPD More than 35 million clones and related products print-optimized Path: /index offers direct access to a multitude of validated clone material corresponding to your favourite genes: Full length clones Full ORF shuttle clones siRNA resources Sequence-verified cDNA clones. RZPD is developer, producer and distributor of products and services for functional genome research as well as integration platform for genome data in full compliance with ISO9001:2000 quality standards. Screening Service May 11 th 2004 - ak RZPD supplements its current Screening service with a PCR Amplification Service of its wide range of cDNA and genomic DNA Pools according to customers needs. The PCR-based Screening Service can be used to analyze libraries of well-known species like human, mouse and rat or of genetically less characterized species like bovine, pig, chicken, or fugu etc. More...

160. The Genome Database Database is ReadWrite! Editing is Now Active. Simple Search. Search, Genomic Segments All Biological Data People Citations, by, Name/GDB ID Keyword DNA Sequence ID, http://www.gdb.org/

Hosted by RTI International and available at mirror sites worldwide What's New (1 Nov 2003): GDB Read-Write Status Restored RTI Assumes GDB Hosting Role ... Editing is Now Active Simple Search Search Genomic Segments All Biological Data People Citations by Name/GDB ID Keyword DNA Sequence ID Note: When doing Name/ID searches, adding to the end of your search text may improve your results. Also, precede a GDB Accession ID with either "GDB:", "REG:", or "CIT:". Other Search Options Help Site Map About GDB ... Prefs For help, contact help@gdb.org.

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