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1. Newsltr24
Pig genome Update No. 24. May 1, 1997. We in the entire U.S. animal genome community owe Dr. Jenny Hergenrother, College of agric. and Life Sciences maps of chromosomes; and Objective 3 Expand the development and usage of internationally shared species genome databases
http://www.genome.iastate.edu/newsletter/nl24.html
Pig Genome Update No. 24
May 1, 1997
We in the entire U.S. animal genome community owe Dr. Neal Jorgensen a big debt of thanks! Neal, more than anyone in the Experiment Stations, helped to develop and shape the National Animal Genome Program which led to the NRSP-8. During his tenure as the lead administrative advisor Neal has helped to organize scientists, plan the program, secure funding for all of the collaborative and cooperative efforts and to defend NRSP-8 from those that who have liked to eliminate it. Neal is retiring from the University of Wisconsin this year where he has been a valued faculty member and administrator for the past 29 years. A reception in his honor will be May 28 and as part of the retirement there will be a gift of a book of letters. Please consider sending Neal a letter of thanks for his efforts. The letters should be unfolded and sent to Ms. Jenny Hergenrother, College of Agric. and Life Sciences, 140 Ag Hall, 1450 Linden Drive, Madison, WI 53706 by no later than May 19. Thanks to some great ideas there will be additional resources to share in 1997.

2. Plant Genome II Abstracts
0404; 2 Biotechnology Center, Huazhong agric. Univ., Wuhan, China TAXA (SST) databases RATED BIOLOGICAL databases TO SUPPORT SUGARCANE, MAIZE AND SORGHUM genome maps. Laurent Grivet
http://www.intl-pag.com/2
Plant Genome II Abstracts
Plant Genome II, January 1994
Plant Genome II Abstracts: Table of Contents
TRACKING DOWN ANCIENT PLANT TRANSPOSONS: ELUCIDATION OF MOBILE ELEMENT INVOLVEMENT IN GENOME EVOLUTION.
Thomas E. Bureau, Shawn E. White and Susan R. Wessler, Department of Botany/Genetics, University of Georgia, Athens, GA 30602 (email: BLTREAUT@BSCR.UGA.EDU).
INTEGRATING LIPID METABOLISM INTO THE GENOME
Tom Cheesbrough, Biology/Microbiology Dept., South Dakota State University, Brookings, SD 57007
MAPPING ENABLES SERENDIPITY.
Edward H. Coe, ARS-USDA and Dept. of Agronomy, Curtis Hall, University of Missouri, Columbia, MO 65211.
GENETIC ENGINEERING OF WHEAT.
Kutty K. Kartha, Ravindra N. Chibbar and Narender S. Nehra, Plant Biotechnology Institute, National Research Council of Canada, 110 Gymnasium Road, Saskatoon, Saskatchewan, Canada, S7N 0W9.
SIMPLE SEQUENCE REPEAT DNA MARKERS FOR GENOME MAPPING AND GENOTYPE IDENTIFICATION.
Perry B. Cregan, Mahinur S. Akkaya, Jiang Rongwen, Soybean and Alfalfa Research Lab, USDA, ARS, Beltsville, MD 20705, Arvind A. Bhagwat, Dept. of Agronomy, University of Maryland, College Park, MD 20742; and Uri Lavi, Inst. of Horticulture, ARO, The Volcanic Center, Bet-Dagan, Israel.
ARABIDOPSIS WORKSHOP, TUES JAN 25TH 3:30-6:00PM

3. BioMed Central | Full Text | Construction Of Two Genetic Linkage Maps In Cultiva
whole genome. SSRs mainly originated from EST databases of M over our maps showed that no alfalfa genome region was with other sorghum maps. Aust J agric Res 1998, 49
http://www.biomedcentral.com/1471-2229/3/9
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... Related articles in PubMed Search PubMed For Julier B Flajoulot S Barre P Cardinet G ... Huyghe C Key E-mail Corresponding author Research article Construction of two genetic linkage maps in cultivated tetraploid alfalfa ( Medicago sativa ) using microsatellite and AFLP markers Bernadette Julier Sandrine Flajoulot Philippe Barre Sylvain Santoni Thierry Huguet and Christian Huyghe Jouffray-Drillaud, INRA, 86600 Lusignan, France Laboratoire des Interactions Plantes-Microorganismes, UMR CNRS-INRA 2594/441, BP27, 31326 Castanet Tolosan cedex, France BMC Plant Biology The electronic version of this article is the complete one and can be found online at: http://www.biomedcentral.com/1471-2229/3/9 Received Accepted Published Outline Abstract Abstract Background Results Discussion ... References Background Alfalfa ( Medicago sativa ) is a major forage crop. The genetic progress is slow in this legume species because of its autotetraploidy and allogamy. The genetic structure of this species makes the construction of genetic maps difficult. To reach this objective, and to be able to detect QTLs in segregating populations, we used the available codominant microsatellite markers (SSRs), most of them identified in the model legume Medicago truncatula from EST database. A genetic map was constructed with AFLP and SSR markers using specific mapping procedures for autotetraploids. The tetrasomic inheritance was analysed in an alfalfa mapping population.

4. Agriculture Links - Internet Links
livestock animal genome, other organism genome, plant reference The databases canbe browsed or queried. plants in the Botanic Gardens, maps and information for
http://www.sl.nsw.gov.au/links/agric.cfm
Where you are: State Library of NSW Find Internet links this site About Find Services What's on PLS Internet links Search engines
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Australian, International, Horticulture Agriculture - Australian
  • Australian Bureau of Agricultural and Resource Economics (ABARE) ABARE is an independent research agency which provides economic forecasts on Australian rural and resource industries. Subjects covered include commodity forecasts, services and infrastructure in the rural sector and risk management in farm businesses. Australian Agriculture Index (AgNet) This site provides links to agricultural organisations and businesses. Agrigate This site is a gateway for online and offline resources for agricultural research. Information resources are selected by a committee of specialist librarians and members of the agriculture research community. Agrigate is a project of the libraries of the Universities of Melbourne, Adelaide and Queensland and the CSIRO. National Farmers' Federation Australia This site provides links to news and weather, commodity prices and markets, as well as technical and government information.

5. The NSF Potato Genome Project - Home
Goals and Research. Accomplishments. databases and Resources wheat, and potato starches. J agric Food Chem51(8) 2283 for the construction of genome wide transcriptome maps. Plant J31
http://www.potatogenome.org/nsf3/home/additional_references.php
Project Goals and Research Accomplishments Databases and Resources ... Links Additional References Home Additional References Back to bibliography Abad MS, Hakimi SM, et al. (1997). Characterization of acquired resistance in lesion-mimic transgenic potato expressing bacterio-opsin. Mol Plant Microbe Interact
Akiyama H, Watanabe T, et al. (2002). [A detection method for recombinant DNA from genetically modified potato (NewLeaf Y potato)]. Shokuhin Eiseigaku Zasshi
Alarcon P, Montoya R, et al. (1991). Clinical trial of home available, mixed diets versus a lactose-free, soy-protein formula for the dietary management of acute childhood diarrhea. J Pediatr Gastroenterol Nutr
Ali GS and Reddy AS (2000). Inhibition of fungal and bacterial plant pathogens by synthetic peptides: in vitro growth inhibition, interaction between peptides and inhibition of disease progression. Mol Plant Microbe Interact
Altre JA and Vandenberg JD (2001). Factors influencing the infectivity of isolates of Paecilomyces fumosoroseus against diamondback moth, Plutella xylostella. J Invertebr Pathol
Alvarez V, Ducasse DA, et al. (1997). Sequencing and characterization of the coat protein and 3' non-coding region of a new sweet potato potyvirus.

6. Genome Biology | Full Text | Wheat Functional Genomics And Engineering Crop Impr
research interactions links databases search information my journal Email mfrancki@agric.wa.gov.au. genome Biology 2002 a variety of genetic maps of wheat that serve
http://www.genomebiology.com/content/gb-2002-3-5-reviews1013
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Post a comment PubMed record ... Related articles in PubMed Search PubMed For Francki M Appels R Key E-mail Corresponding author Minireview Wheat functional genomics and engineering crop improvement Michael Francki and Rudi Appels Department of Agriculture, Crop Improvement Institute, Locked Bag No 4,Bentley WA 6983, Australia CRC for Molecular Plant Breeding - Western node, School of Biological Science, Murdoch University, Murdoch WA 6150,Australia Genome Biology Subject areas: Plant biology, Genome studies The electronic version of this article is the complete one and can be found online at: http://genomebiology.com/2002/3/5/reviews/1013.1 Published Abstract Genetic mapping and determination of the organization of the wheat genome are changing the wheat-breeding process. New initiatives to analyze the expressed portion of the wheat genome and structural analysis of the genomes of Arabidopsis and rice are increasing our knowledge of the genes that are linked to key agronomically important traits.

7. Genome Biology | Full Text | Clustering Gene-expression Data With Repeated Measu
databases search information my journal. Enter your email address to receive regular updates from genome 5, self-organizing maps 6, k-means 7 J agric, Biol Environ Stat
http://www.genomebiology.com/2003/4/5/R34
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Download references Post a comment ... ISI Web of Science Search PubMed For Yeung KY Medvedovic M Bumgarner RE Key E-mail Corresponding author Software Clustering gene-expression data with repeated measurements Ka Yee Yeung Mario Medvedovic and Roger E Bumgarner Department of Microbiology, University of Washington, Seattle, WA 98195, USA Center for Genome Information, Department of Environmental Health, University of Cincinnati Medical Center, 3223 Eden Ave. ML 56, Cincinnati, OH 45267-0056, USA Genome Biology Subject areas: Bioinformatics, Genome studies The electronic version of this article is the complete one and can be found online at: http://genomebiology.com/2003/4/5/R34 Received Revisions received Accepted Published Abstract Clustering is a common methodology for the analysis of array data, and many research laboratories are generating array data with repeated measurements. We evaluated several clustering algorithms that incorporate repeated measurements, and show that algorithms that take advantage of repeated measurements yield more accurate and more stable clusters. In particular, we show that the infinite mixture model-based approach with a built-in error model produces superior results. Outline Background Abstract Background Results Discussion ... References The two most frequently performed analyses on gene-expression data are the inference of differentially expressed genes and clustering. Clustering is a useful exploratory technique for gene-expression data as it groups similar objects together and allows the biologist to identify potentially meaningful relationships between the objects (either genes or experiments or both). For example, in the work of Eisen

8. Nucl. Acids. Res. -- Matthews Et Al. 31 (1): 183
records selected from external databases andresults of BLAST searches GrainGenes contains 81 fullgenome maps, accessedunder the Map a review. Aust. J. agric. Res., 52, 10431077.
http://nar.oupjournals.org/cgi/content/full/31/1/183
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Nucleic Acids Research, 2003, Vol. 31, No. 1
Oxford University Press
GrainGenes, the genome database for small-grain crops
David E. Matthews Victoria L. Carollo Gerard R. Lazo and Olin D. Anderson USDA-ARS, Department of Plant Breeding, Cornell University, Ithaca, NY 14850-1901, USA USDA-ARS Western Regional Research Center, 800 Buchanan Street, Albany, CA 94710-1105, USA *To whom correspondence should be addressed. Tel: +1 607 255 9951; Email: matthews@greengenes.cit.cornell.edu Received August 27, 2002; Revised September 25, 2002. Accepted October 2, 2002 ABSTRACT GrainGenes, http://www.graingenes.org

9. Science & Technology Division - Agriculture
Forestry database program, Dendrome (Forest tree genome database) The Tree Book directory,news, conservation, publications,software, databases, maps and links
http://www.vpl.ca/branches/LibrarySquare/tec/agric.html
Vancouver Public Library Online Home Kids
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... Consumer Health Links
Agriculture
Field Crops
Forestry Gardening
Field Crops B.C. Ministry of Agriculture, Food and Fisheries Home Page
Links to Canadian agricultural sites, a list of related B.C. associations and information on a variety of food and animal crops grown or raised on B.C. farms. City Farmer's Urban Agriculture Notes
Vancouver-based site that provides information on urban agriculture, including composting and community gardening Commercial Vegetable Production Guides Guides cover variety, climate, soil, seed, transplanting, fertilizing etc for perennial, root, green and other vegetables. Directory of Organics in Canada
Fresh from the Farm

Produced by the fraser Valley Farm Direct Marketing Association to help you find the products you most enjoy buying fresh from local farms The State of Food and Agriculture 2002
FAO report on the current developments and emerging issues affecting world agriculture. Forestry
B.C. Ministry of Forests Home Page
Gives accesss to a variety of resources including, The National Forestry database program, Dendrome (Forest tree genome database) The Tree Book (detailed information and illustrations about all varieties of trees in B.C.)Forest Practices Code guidebooks and much more Canadian Forest Service: Pacific Forestry Centre The CFS promotes the sustainable development of Canada's forests and competiveness of the Canadian Forest sector. The site includes access to links about Mushrooms of the Pacific Northwest and The Mountain Pine Beetle

10. Bajwa Kogan, IPM Informatics And Decision Support
day products (calculators, phenology models, maps, and map Ask an Expert http//www1.agric.gov.ab.ca ofthese resources include genome databases for several
http://ipmworld.umn.edu/chapters/Bajwa.htm

11. Genome Research -- Peterson Et Al. 12 (5): 795
sorghum genome is approximately .br/en/)databases maps, and (5) sequencing of clones from Cot librariesmay represent a means by which the diversity of sequences foundin a genome
http://www.genome.org/cgi/content/full/12/5/795
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Published online before print April 12, 2002, 10.1101/gr.226102
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All Versions of this Article: (most recent) GR-2261Rv1 Vol. 12, Issue 5, 795-807, May 2002
LETTER
Integration of Cot Analysis, DNA Cloning, and High-Throughput Sequencing Facilitates Genome Characterization and Gene Discovery
Daniel G. Peterson, Stefan R. Schulze, Erica B. Sciara, Scott A. Lee, John E. Bowers

12. Wheat Mapping Projects - North America
CORNELL UNIVERSITY LO ITHACA, NEW YORK 14853. CG 9437300-0324 GY 1994 CL PRIMARY CLASSIFICATION GENERAL CLASSIF. CONTACT Plant genome Data and the NRICGP genome mapping databases maps, clones, genome mapping, germplasm and traits. Efforts continue to coordinate the wheat and tree databases
http://www.nal.usda.gov/pgdic/Map_proj/wheat.html

13. GIW 99 Program Registration Dec. 13 1630 - 1830 Garden Room
of agric. Interaction Data, Kenichiro Fukuda, Toshihisa Takagi P42 Toward a DataMining Service from Large and Heterogeneous genome databases in genomeNet
http://giw.ims.u-tokyo.ac.jp/giw99/Program/program.txt

14. Genome Biology | Search Results Wolfe_K In Author
profiles from Gene Expression Atlas, SAGEmap and TissueInfo databases. ZimmermannW, Butler G, Wolfe KH genome Biol 2003 Wolfe KL, Liu RH J agric Food Chem 2003
http://genomebiology.com/search/results.asp?db=pm&terms=Wolfe_K&field=AU

15. Genome Biology | Full Text | Wheat Functional Genomics And Engineering Crop Impr
to a correlation of genetic and physical maps that will genespecific markers fromEST databases, with model the complexities of the wheat genome leads to
http://genomebiology.com/2002/3/5/reviews/1013
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Post a comment PubMed record ... Related articles in PubMed Search PubMed For Francki M Appels R Key E-mail Corresponding author Minireview Wheat functional genomics and engineering crop improvement Michael Francki and Rudi Appels Department of Agriculture, Crop Improvement Institute, Locked Bag No 4,Bentley WA 6983, Australia CRC for Molecular Plant Breeding - Western node, School of Biological Science, Murdoch University, Murdoch WA 6150,Australia Genome Biology Subject areas: Plant biology, Genome studies The electronic version of this article is the complete one and can be found online at: http://genomebiology.com/2002/3/5/reviews/1013.1 Published Abstract Genetic mapping and determination of the organization of the wheat genome are changing the wheat-breeding process. New initiatives to analyze the expressed portion of the wheat genome and structural analysis of the genomes of Arabidopsis and rice are increasing our knowledge of the genes that are linked to key agronomically important traits.

16. Rhodes University
developing electron density maps; structural superimposition III Gene and genome sequencingstrategies; DNA and protein databases; database searching using
http://www.ru.ac.za/academic/calendar2004/biochem.html
Rhodes University / Academic / Calendar2004 / Biochem
OFFICIAL CALENDAR 2004
Useful Addresses and Telephone Numbers Diary for 2004 The University, Grahamstown Campus ... Student Fees
CG Whiteley, PhD(Natal), MRSC, CChem
PD Rose, BSc (Hons)(Cape Town), PhD(Rhodes)
Professor of Biochemistry and Dean of Research
JR Duncan, PhD(Natal), FRSSAf
GL Blatch, BSc(Hons)(Natal), PhD (Cape Town), Wellcome Trust Senior Fellow
Senior Lecturer in Biochemistry
G Bradley, PhD (UPE)
Lecturers in Biochemistry
B Pletschke, PhD (UPE)
B Wilhelmi, B.Tech: Ed(TWR), PhD (Rhodes)
Lecturers in Microbiology J Dames, PhD (Wits) C Knox, PhD (Wits) Lecturer in Environmental Biotechnology To be appointed Mellon Foundation Programme Lecturer (Biotechnology) J Limson, PhD (Rhodes) Research Associates A Boshoff, PhD (Rhodes) W Leukes, PhD (Rhodes) N Gardiner PhD (Rhodes) Visiting Fellow E Goyvaerts, PhD (Singapore) The Department offers courses in Biochemistry, Microbiology and Biotechnology. See the Departmental Web Page http://www.ru.ac.za/biochem for further details, particularly on the contents of courses. Introductory Molecular Biology Introductory Molecular Biology (IMB) is a two-semester subject offered at the second year level to students not majoring in either Biochemistry or Microbiology who require a basic understanding in biochemistry and molecular biology for application in other biological sciences, law, journalism, pharmacy, computer science and education. The subject is comprises of two semester courses offered in Biochemistry and Microbiology, namely IMB 201 (same as BCH 201) and IMB 202 (same as MIC 202). Credit may be obtained in each course separately and, in addition, an aggregate mark of at least 50% will be deemed to be equivalent to a two-credit course IMB 2, provided that a candidate obtains the required subminimum (40%) in each component. No supplementary examinations will be offered for either course. Practical reports, essays and class tests collectively comprise the class mark, which forms part of the final mark.

17. Rice Genome Newsletter (Volume 3, Issue 1, July 1994)
for studying metabolic pathways and expression maps was presented model plant forall cereal genome mapping and Bigwood on integration of databases, ACeDB and
http://rgp.dna.affrc.go.jp/rgp/ricegenomenewslet/nl5.html
RICE GENOME (Volume 3, Issue 1, July 1994)
Put to HTLM by Ilkka Havukkala. Cover page: ISSN 0918-4341
Rice Genome
Newsletter for Rice Genome Analysis Volume 3, Number 1 July 1994
Cover page picture

Rice Genome Research Program (RGP) Inside front cover: Announcement This is the fifth issue of the newsletter for the Rice Genome Research Program in NIAR/STAFF. The next issue will be published in December 1994. Editorial members Editor-in-chief: T. Sasaki Editors: N. Kurata, A. Miyao, Y. Nagamura, M. Yano Assistant Editors: I. Ashikawa, Y. Harushima, Y. Katayose, J. Song, Y. Umehara Technical editing and English: I. Havukkala Advisor: K. Kobayashi All correspondence should be addressed to: Editorial Office of Rice Genome Rice Genome Research Program 446-1, Ippaizuka Kamiyokoba Tsukuba Ibaraki 305 Japan Fax: +81-298-38-2245 or +81-298-38-2302 email: ilkka@staff.or.jp Cover page: Colony hybridization image of YAC high density filters using DNA marker R845 located on chromosome 6. Five filters containing about 7000 clones were used for YAC screening. The signals were detected with the ECL system. Rice Genome Research Program (RGP) is a part of the Genome Research Program of the Ministry of Agriculture, Forestry and Fisheries of Japan (MAFF).

18. Molecular Markers In Plant Genome Analysis
of information and a number of databases are being have proven utility in constructionof linkage maps among species SM and Kresovich, S., in genome Mapping in
http://www.ias.ac.in/currsci/jul25/articles15.htm
Molecular markers in plant genome analysis Swati P. Joshi, Prabhakar K. Ranjekar and Vidya S. Gupta* Plant Molecular Biology Group, Division of Biochemical Sciences, National Chemical Laboratory, Pune 411 008, India P LANTS have always been looked upon as a key source of energy for survival and evolution of the animal kingdom, thus forming a base for every ecological pyramid. Over the last few decades plant genomics has been studied extensively bringing about a revolution in this area. Molecular markers, useful for plant genome analysis, have now become an important tool in this revolution. In this article we attempt to review most of the available DNA markers that can be routinely employed in various aspects of plant genome analysis such as taxonomy, phylogeny, ecology, genetics and plant breeding. During the early period of research, classical strategies including comparative anatomy, physiology and embryology were employed in genetic analysis to determine inter- and intra-species variability. In the past
*For correspondence. (e-mail: vidya@ems.ncl.res.in)

19. Linkseite
genome Database; Interactive Forest maps (weltweit);Mistletoe Center (Datenbank Virus databases on-line; Virtual Library - Bio
http://bfw.ac.at/040/1480.html
Bundesamt und Forschungszentrum für Wald Index Bibliothek Suche
Linkseite Voshmgir D. Online Publikationen: Voshmgir Publikationsliste: Voshmgir Forst- und Agrarportale
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Forst- und Agrarportale Forstliche Verzeichnisse und Kataloge

20. Genomics Posters 2003
to act as anchors to integrate maps constructed from and for locating genes of interestin the genome. SSR enriched library and searching databases were useful
http://www.fgsc.net/asil2003/GenomicsPosterAbstracts2003.htm
Genomics and Proteomics
239. The Ashbya gossypii genome: lessons learned by comparison to the Saccharomyces cerevisiae genome. S. Brachat , F. S. Dietrich , S. Voegeli1, A. Lerch , T. Gaffney and P. Philippsen Syngenta, Research Triangle Park, NC, USA. Current Address: Department of Molecular Genetics and Microbiology, Duke University Medical Centre, Durham, NC, USA.
We completed the sequencing of the 9Mb genome the filamentous fungus Ashbya gossypii which encodes 4720 protein coding genes, 190 tRNA genes, 50 small RNA genes and 40-50 copies of the rRNA genes. With respect to the size and the number of genes, this represents presently the smallest genome of a free living eukaryot. Surprisingly, the protein coding genes revealed striking similarities to that of S. cerevisiae with over 95% of the A. gossypii genes sharing significant homology to S. cerevisiae genes. In addition, 90% of A. gossypii genes show both, homology and synteny, with the genome of the baker's yeast. The synteny can be described as "relaxed synteny" since the gene order in any A. gossypii

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